Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.01□□□□□ -0.17
PdgfbP31240 Gm37259-201ENSMUST00000193903 849 ntBASIC14.01□□□□□ -0.17
PdgfbP31240 Gm42627-201ENSMUST00000197347 224 ntBASIC14.01□□□□□ -0.17
PdgfbP31240 Olfr284-202ENSMUST00000206647 966 ntBASIC14.01□□□□□ -0.17
PdgfbP31240 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.01□□□□□ -0.17
PdgfbP31240 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfbP31240 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfbP31240 Snora73a-201ENSMUST00000082453 205 ntBASIC14.01□□□□□ -0.17
PdgfbP31240 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfbP31240 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfbP31240 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfbP31240 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfbP31240 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfbP31240 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.01□□□□□ -0.17
PdgfbP31240 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PdgfbP31240 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PdgfbP31240 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PdgfbP31240 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PdgfbP31240 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PdgfbP31240 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
PdgfbP31240 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14□□□□□ -0.17
PdgfbP31240 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Mir7070-201ENSMUST00000183657 86 ntBASIC14□□□□□ -0.17
PdgfbP31240 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14□□□□□ -0.17
PdgfbP31240 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14□□□□□ -0.17
PdgfbP31240 Gm9368-201ENSMUST00000219348 831 ntBASIC14□□□□□ -0.17
PdgfbP31240 Gm9176-201ENSMUST00000219955 1120 ntBASIC14□□□□□ -0.17
PdgfbP31240 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
PdgfbP31240 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PdgfbP31240 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PdgfbP31240 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
PdgfbP31240 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.99□□□□□ -0.17
PdgfbP31240 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.99□□□□□ -0.17
PdgfbP31240 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.99□□□□□ -0.17
PdgfbP31240 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PdgfbP31240 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.99□□□□□ -0.17
PdgfbP31240 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PdgfbP31240 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PdgfbP31240 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.99□□□□□ -0.17
PdgfbP31240 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.99□□□□□ -0.17
PdgfbP31240 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.99□□□□□ -0.17
PdgfbP31240 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Gm18753-201ENSMUST00000201000 566 ntBASIC13.99□□□□□ -0.17
PdgfbP31240 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Gm5161-201ENSMUST00000075243 853 ntBASIC13.99□□□□□ -0.17
PdgfbP31240 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PdgfbP31240 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
PdgfbP31240 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PdgfbP31240 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PdgfbP31240 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PdgfbP31240 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PdgfbP31240 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PdgfbP31240 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PdgfbP31240 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PdgfbP31240 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PdgfbP31240 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PdgfbP31240 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PdgfbP31240 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PdgfbP31240 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PdgfbP31240 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms