Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.13□□□□□ -0.63
P01788 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.13□□□□□ -0.63
P01788 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.13□□□□□ -0.63
P01788 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
P01788 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
P01788 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
P01788 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
P01788 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Gm7461-201ENSMUST00000058918 827 ntBASIC11.13□□□□□ -0.63
P01788 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.13□□□□□ -0.63
P01788 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
P01788 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.13□□□□□ -0.63
P01788 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.13□□□□□ -0.63
P01788 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P01788 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.12□□□□□ -0.63
P01788 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
P01788 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
P01788 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
P01788 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
P01788 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.12□□□□□ -0.63
P01788 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.12□□□□□ -0.63
P01788 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.12□□□□□ -0.63
P01788 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
P01788 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
P01788 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.12□□□□□ -0.63
P01788 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
P01788 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
P01788 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.12□□□□□ -0.63
P01788 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.12□□□□□ -0.63
P01788 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P01788 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
P01788 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
P01788 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
P01788 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
P01788 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
P01788 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.11□□□□□ -0.63
P01788 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.11□□□□□ -0.63
P01788 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.11□□□□□ -0.63
P01788 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01788 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms