Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Gm27920-201ENSMUST00000183953 96 ntBASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp5Q9D7S9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Gm18195-201ENSMUST00000207604 706 ntBASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Gm44065-201ENSMUST00000203184 3527 ntBASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp5Q9D7S9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp5Q9D7S9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp5Q9D7S9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp5Q9D7S9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms