Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh18Q8VHR0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Paupar-201ENSMUST00000194826 3482 ntBASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh18Q8VHR0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh18Q8VHR0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Mir5131-201ENSMUST00000175426 93 ntBASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdh18Q8VHR0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms