Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm27663-201ENSMUST00000184839 110 ntBASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 AA619741-201ENSMUST00000195095 646 ntBASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Gm9229-201ENSMUST00000222777 126 ntBASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ndc1Q8VCB1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Gm10275-202ENSMUST00000168697 495 ntBASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Gm5186-201ENSMUST00000218781 920 ntBASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Gm10275-201ENSMUST00000092620 635 ntBASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ndc1Q8VCB1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Gm6218-201ENSMUST00000219812 628 ntBASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Gm20445-201ENSMUST00000061905 565 ntBASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ndc1Q8VCB1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Ndc1Q8VCB1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms