Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 CYP2A7P1-201ENST00000595391 815 ntBASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CNKSR3Q6P9H4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 AC012317.2-201ENST00000623305 2251 ntBASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 LINC00895-201ENST00000629028 1637 ntBASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.18■□□□□ 0.5
CNKSR3Q6P9H4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 AL035456.1-201ENST00000456064 1369 ntBASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 KRT8P49-201ENST00000604166 1432 ntBASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 SLC25A6P5-201ENST00000435663 894 ntBASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 AC104581.1-202ENST00000635932 2618 ntBASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 AL021920.2-201ENST00000624828 1351 ntBASIC18.17■□□□□ 0.5
CNKSR3Q6P9H4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.16■□□□□ 0.5
CNKSR3Q6P9H4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms