Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.86□□□□□ -0.19
Hoxa4P06798 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.86□□□□□ -0.19
Hoxa4P06798 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.86□□□□□ -0.19
Hoxa4P06798 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hoxa4P06798 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.85□□□□□ -0.19
Hoxa4P06798 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hoxa4P06798 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Hoxa4P06798 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hoxa4P06798 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Hoxa4P06798 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.85□□□□□ -0.19
Hoxa4P06798 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.85□□□□□ -0.19
Hoxa4P06798 Gm2445-201ENSMUST00000182798 989 ntBASIC13.85□□□□□ -0.19
Hoxa4P06798 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.85□□□□□ -0.19
Hoxa4P06798 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.85□□□□□ -0.19
Hoxa4P06798 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.85□□□□□ -0.19
Hoxa4P06798 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Hoxa4P06798 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Hoxa4P06798 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Hoxa4P06798 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxa4P06798 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hoxa4P06798 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.84□□□□□ -0.19
Hoxa4P06798 Gm8927-201ENSMUST00000181978 981 ntBASIC13.84□□□□□ -0.19
Hoxa4P06798 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.84□□□□□ -0.19
Hoxa4P06798 Gm18905-201ENSMUST00000205454 928 ntBASIC13.84□□□□□ -0.19
Hoxa4P06798 Gm44719-201ENSMUST00000206404 149 ntBASIC13.84□□□□□ -0.19
Hoxa4P06798 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hoxa4P06798 Gm3222-201ENSMUST00000071282 990 ntBASIC13.84□□□□□ -0.19
Hoxa4P06798 Mir497b-201ENSMUST00000093601 125 ntBASIC13.84□□□□□ -0.19
Hoxa4P06798 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.84□□□□□ -0.19
Hoxa4P06798 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Hoxa4P06798 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hoxa4P06798 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.84□□□□□ -0.19
Hoxa4P06798 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Hoxa4P06798 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.84□□□□□ -0.19
Hoxa4P06798 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxa4P06798 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxa4P06798 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.83□□□□□ -0.19
Hoxa4P06798 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxa4P06798 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxa4P06798 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxa4P06798 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Hoxa4P06798 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Hoxa4P06798 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxa4P06798 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Hoxa4P06798 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxa4P06798 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxa4P06798 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms