Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trdmt1O55055 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.46■□□□□ 0.07
Trdmt1O55055 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trdmt1O55055 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trdmt1O55055 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trdmt1O55055 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
Trdmt1O55055 Gm8062-201ENSMUST00000139696 444 ntBASIC15.46■□□□□ 0.07
Trdmt1O55055 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.46■□□□□ 0.07
Trdmt1O55055 Gm24196-201ENSMUST00000179161 110 ntBASIC15.46■□□□□ 0.07
Trdmt1O55055 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.46■□□□□ 0.07
Trdmt1O55055 Gm38671-201ENSMUST00000200573 130 ntBASIC15.46■□□□□ 0.07
Trdmt1O55055 Gm45331-201ENSMUST00000209868 554 ntBASIC15.46■□□□□ 0.07
Trdmt1O55055 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.46■□□□□ 0.07
Trdmt1O55055 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.46■□□□□ 0.07
Trdmt1O55055 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.46■□□□□ 0.07
Trdmt1O55055 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.46■□□□□ 0.07
Trdmt1O55055 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trdmt1O55055 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trdmt1O55055 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trdmt1O55055 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trdmt1O55055 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trdmt1O55055 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trdmt1O55055 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trdmt1O55055 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Trdmt1O55055 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.46■□□□□ 0.06
Trdmt1O55055 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trdmt1O55055 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trdmt1O55055 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.45■□□□□ 0.06
Trdmt1O55055 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trdmt1O55055 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Trdmt1O55055 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trdmt1O55055 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.45■□□□□ 0.06
Trdmt1O55055 Mir698-201ENSMUST00000102164 109 ntBASIC15.45■□□□□ 0.06
Trdmt1O55055 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trdmt1O55055 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Trdmt1O55055 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Trdmt1O55055 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.45■□□□□ 0.06
Trdmt1O55055 Gm29741-201ENSMUST00000192667 421 ntBASIC15.45■□□□□ 0.06
Trdmt1O55055 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.45■□□□□ 0.06
Trdmt1O55055 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.45■□□□□ 0.06
Trdmt1O55055 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.45■□□□□ 0.06
Trdmt1O55055 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.45■□□□□ 0.06
Trdmt1O55055 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.45■□□□□ 0.06
Trdmt1O55055 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.45■□□□□ 0.06
Trdmt1O55055 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trdmt1O55055 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trdmt1O55055 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trdmt1O55055 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trdmt1O55055 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
Trdmt1O55055 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trdmt1O55055 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Gm42693-201ENSMUST00000196779 631 ntBASIC15.44■□□□□ 0.06
Trdmt1O55055 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.44■□□□□ 0.06
Trdmt1O55055 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trdmt1O55055 Gm10478-201ENSMUST00000084451 396 ntBASIC15.44■□□□□ 0.06
Trdmt1O55055 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Trdmt1O55055 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.44■□□□□ 0.06
Trdmt1O55055 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Trdmt1O55055 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.44■□□□□ 0.06
Trdmt1O55055 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.44■□□□□ 0.06
Trdmt1O55055 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trdmt1O55055 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trdmt1O55055 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trdmt1O55055 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trdmt1O55055 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Trdmt1O55055 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trdmt1O55055 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trdmt1O55055 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trdmt1O55055 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms