Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Tcf21-202ENSMUST00000218002 1788 ntBASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav7n-4A0A075B620 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav7n-4A0A075B620 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav7n-4A0A075B620 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms