Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 AL671277.1-201ENST00000429656 993 ntBASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 AC133963.1-201ENST00000504166 1679 ntBASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 RN7SL589P-201ENST00000481268 310 ntBASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 AC134043.2-201ENST00000624206 2238 ntBASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SYNGAP1Q96PV0 LTB4R2-202ENST00000528054 3092 ntBASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 FAM86GP-201ENST00000448322 971 ntBASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 SPDYE11-202ENST00000450699 704 ntBASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 KRT8P48-201ENST00000515599 1220 ntBASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 SPDYE9P-201ENST00000570642 692 ntBASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 SPDYE10P-202ENST00000612005 668 ntBASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 SPDYE8P-202ENST00000612377 668 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms