Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 EGFEM1P-202ENST00000431685 1563 ntBASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 AC068880.1-201ENST00000507289 2297 ntBASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC38A9Q8NBW4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 AL121761.2-201ENST00000598007 1648 ntBASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 ADH5P3-201ENST00000433842 1137 ntBASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 AC140658.5-201ENST00000438532 169 ntBASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 AC112191.1-201ENST00000523689 701 ntBASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 MIR4515-201ENST00000584082 81 ntBASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 AC099522.2-201ENST00000607001 744 ntBASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 AL645728.2-201ENST00000641974 660 ntBASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC38A9Q8NBW4 GNAS-203ENST00000306120 1878 ntBASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 AC016396.2-201ENST00000562575 1417 ntBASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 AL139400.1-201ENST00000366220 510 ntBASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 HMGA1P7-201ENST00000406908 502 ntBASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 AC022145.2-201ENST00000598203 171 ntBASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 NOC2LP2-201ENST00000407594 1944 ntBASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLC38A9Q8NBW4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms