Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Sssca1P56873 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Sssca1P56873 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.44□□□□□ -0.58
Sssca1P56873 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.44□□□□□ -0.58
Sssca1P56873 Gm37230-201ENSMUST00000194491 818 ntBASIC11.44□□□□□ -0.58
Sssca1P56873 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.44□□□□□ -0.58
Sssca1P56873 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.44□□□□□ -0.58
Sssca1P56873 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.44□□□□□ -0.58
Sssca1P56873 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Sssca1P56873 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sssca1P56873 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Sssca1P56873 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sssca1P56873 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.43□□□□□ -0.58
Sssca1P56873 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Sssca1P56873 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sssca1P56873 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.43□□□□□ -0.58
Sssca1P56873 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.43□□□□□ -0.58
Sssca1P56873 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sssca1P56873 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Gm21362-201ENSMUST00000194272 928 ntBASIC11.43□□□□□ -0.58
Sssca1P56873 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.43□□□□□ -0.58
Sssca1P56873 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.43□□□□□ -0.58
Sssca1P56873 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.43□□□□□ -0.58
Sssca1P56873 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.43□□□□□ -0.58
Sssca1P56873 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sssca1P56873 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.43□□□□□ -0.58
Sssca1P56873 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.43□□□□□ -0.58
Sssca1P56873 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sssca1P56873 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.43□□□□□ -0.58
Sssca1P56873 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sssca1P56873 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sssca1P56873 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sssca1P56873 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Sssca1P56873 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sssca1P56873 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.42□□□□□ -0.58
Sssca1P56873 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms