Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm2272-201ENSMUST00000194903 582 ntBASIC13.26□□□□□ -0.29
Sox2P48432 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sox2P48432 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.26□□□□□ -0.29
Sox2P48432 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.26□□□□□ -0.29
Sox2P48432 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sox2P48432 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
Sox2P48432 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox2P48432 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox2P48432 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox2P48432 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox2P48432 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.25□□□□□ -0.29
Sox2P48432 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox2P48432 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.25□□□□□ -0.29
Sox2P48432 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Sox2P48432 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Gm16198-201ENSMUST00000118766 670 ntBASIC13.25□□□□□ -0.29
Sox2P48432 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.25□□□□□ -0.29
Sox2P48432 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox2P48432 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox2P48432 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox2P48432 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.25□□□□□ -0.29
Sox2P48432 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.25□□□□□ -0.29
Sox2P48432 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox2P48432 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.25□□□□□ -0.29
Sox2P48432 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sox2P48432 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Sox2P48432 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Sox2P48432 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox2P48432 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sox2P48432 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.24□□□□□ -0.29
Sox2P48432 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.24□□□□□ -0.29
Sox2P48432 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox2P48432 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sox2P48432 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Gm11452-201ENSMUST00000122376 690 ntBASIC13.24□□□□□ -0.29
Sox2P48432 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox2P48432 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.24□□□□□ -0.29
Sox2P48432 Gm10060-201ENSMUST00000212002 111 ntBASIC13.24□□□□□ -0.29
Sox2P48432 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sox2P48432 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sox2P48432 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Sox2P48432 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox2P48432 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms