Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a20bO88575 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Gm16570-201ENSMUST00000161951 436 ntBASIC15.34■□□□□ 0.05
Slc6a20bO88575 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.34■□□□□ 0.05
Slc6a20bO88575 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.34■□□□□ 0.05
Slc6a20bO88575 Gm26461-201ENSMUST00000175064 290 ntBASIC15.34■□□□□ 0.05
Slc6a20bO88575 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a20bO88575 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a20bO88575 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a20bO88575 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a20bO88575 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a20bO88575 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.33■□□□□ 0.05
Slc6a20bO88575 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a20bO88575 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Slc6a20bO88575 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a20bO88575 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a20bO88575 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a20bO88575 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.33■□□□□ 0.04
Slc6a20bO88575 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Gm27772-201ENSMUST00000184900 187 ntBASIC15.33■□□□□ 0.04
Slc6a20bO88575 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.33■□□□□ 0.04
Slc6a20bO88575 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.33■□□□□ 0.04
Slc6a20bO88575 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.33■□□□□ 0.04
Slc6a20bO88575 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a20bO88575 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.32■□□□□ 0.04
Slc6a20bO88575 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Slc6a20bO88575 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Proscos-202ENSMUST00000178990 666 ntBASIC15.32■□□□□ 0.04
Slc6a20bO88575 Gm29705-201ENSMUST00000212598 474 ntBASIC15.32■□□□□ 0.04
Slc6a20bO88575 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Gm18473-201ENSMUST00000220543 868 ntBASIC15.32■□□□□ 0.04
Slc6a20bO88575 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.32■□□□□ 0.04
Slc6a20bO88575 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.32■□□□□ 0.04
Slc6a20bO88575 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Slc6a20bO88575 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a20bO88575 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms