Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VPS4BO75351 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS4BO75351 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
VPS4BO75351 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VPS4BO75351 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS4BO75351 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VPS4BO75351 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
VPS4BO75351 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.81■□□□□ 0.28
VPS4BO75351 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.81■□□□□ 0.28
VPS4BO75351 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.81■□□□□ 0.28
VPS4BO75351 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VPS4BO75351 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VPS4BO75351 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.81■□□□□ 0.28
VPS4BO75351 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.81■□□□□ 0.28
VPS4BO75351 AC092183.1-201ENST00000469884 875 ntBASIC16.81■□□□□ 0.28
VPS4BO75351 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.81■□□□□ 0.28
VPS4BO75351 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
VPS4BO75351 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.81■□□□□ 0.28
VPS4BO75351 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.81■□□□□ 0.28
VPS4BO75351 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.81■□□□□ 0.28
VPS4BO75351 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VPS4BO75351 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.81■□□□□ 0.28
VPS4BO75351 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
VPS4BO75351 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VPS4BO75351 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VPS4BO75351 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.81■□□□□ 0.28
VPS4BO75351 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.81■□□□□ 0.28
VPS4BO75351 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS4BO75351 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS4BO75351 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VPS4BO75351 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VPS4BO75351 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS4BO75351 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.8■□□□□ 0.28
VPS4BO75351 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS4BO75351 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
VPS4BO75351 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.8■□□□□ 0.28
VPS4BO75351 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VPS4BO75351 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.8■□□□□ 0.28
VPS4BO75351 AL390719.2-201ENST00000606993 987 ntBASIC16.8■□□□□ 0.28
VPS4BO75351 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS4BO75351 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS4BO75351 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VPS4BO75351 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
VPS4BO75351 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS4BO75351 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS4BO75351 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS4BO75351 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS4BO75351 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS4BO75351 FLJ38576-201ENST00000623820 2459 ntBASIC16.79■□□□□ 0.28
VPS4BO75351 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.79■□□□□ 0.28
VPS4BO75351 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS4BO75351 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VPS4BO75351 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS4BO75351 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS4BO75351 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS4BO75351 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
VPS4BO75351 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.79■□□□□ 0.28
VPS4BO75351 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
VPS4BO75351 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS4BO75351 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
VPS4BO75351 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS4BO75351 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS4BO75351 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS4BO75351 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS4BO75351 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
VPS4BO75351 GUSBP12-201ENST00000513727 720 ntBASIC16.79■□□□□ 0.28
VPS4BO75351 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS4BO75351 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.79■□□□□ 0.28
VPS4BO75351 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VPS4BO75351 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS4BO75351 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms