Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Gm27742-201ENSMUST00000184667 60 ntBASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf4Q9QZS2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Gm15372-201ENSMUST00000120729 834 ntBASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf4Q9QZS2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf4Q9QZS2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf4Q9QZS2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms