Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Gm18737-201ENSMUST00000173594 937 ntBASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.61■□□□□ 0.25
Samm50Q8BGH2 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.6■□□□□ 0.25
Samm50Q8BGH2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.6■□□□□ 0.25
Samm50Q8BGH2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Samm50Q8BGH2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Samm50Q8BGH2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms