Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn4bQ7M729 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Gm25287-201ENSMUST00000103846 110 ntBASIC13.8□□□□□ -0.2
Scn4bQ7M729 Gm22918-201ENSMUST00000103855 110 ntBASIC13.8□□□□□ -0.2
Scn4bQ7M729 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Scn4bQ7M729 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Gm9824-201ENSMUST00000178707 561 ntBASIC13.8□□□□□ -0.2
Scn4bQ7M729 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn4bQ7M729 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.8□□□□□ -0.2
Scn4bQ7M729 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn4bQ7M729 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.79□□□□□ -0.2
Scn4bQ7M729 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.79□□□□□ -0.2
Scn4bQ7M729 Gm13823-201ENSMUST00000119930 345 ntBASIC13.79□□□□□ -0.2
Scn4bQ7M729 Gm6222-201ENSMUST00000120787 396 ntBASIC13.79□□□□□ -0.2
Scn4bQ7M729 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.79□□□□□ -0.2
Scn4bQ7M729 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.79□□□□□ -0.2
Scn4bQ7M729 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.79□□□□□ -0.2
Scn4bQ7M729 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Scn4bQ7M729 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.78□□□□□ -0.2
Scn4bQ7M729 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.78□□□□□ -0.2
Scn4bQ7M729 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn4bQ7M729 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms