Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.56□□□□□ -0.4
Rab42Q0PD08 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Rab42Q0PD08 AV026068-213ENSMUST00000223675 1171 ntBASIC12.56□□□□□ -0.4
Rab42Q0PD08 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.56□□□□□ -0.4
Rab42Q0PD08 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.56□□□□□ -0.4
Rab42Q0PD08 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Celf4-206ENSMUST00000224553 1729 ntBASIC12.56□□□□□ -0.4
Rab42Q0PD08 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rab42Q0PD08 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rab42Q0PD08 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Gm18195-201ENSMUST00000207604 706 ntBASIC12.55□□□□□ -0.4
Rab42Q0PD08 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab42Q0PD08 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.54□□□□□ -0.4
Rab42Q0PD08 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.54□□□□□ -0.4
Rab42Q0PD08 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.54□□□□□ -0.4
Rab42Q0PD08 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.54□□□□□ -0.4
Rab42Q0PD08 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.54□□□□□ -0.4
Rab42Q0PD08 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.54□□□□□ -0.4
Rab42Q0PD08 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab42Q0PD08 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.53□□□□□ -0.4
Rab42Q0PD08 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab42Q0PD08 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.53□□□□□ -0.4
Rab42Q0PD08 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab42Q0PD08 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab42Q0PD08 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Rab42Q0PD08 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab42Q0PD08 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rab42Q0PD08 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab42Q0PD08 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab42Q0PD08 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab42Q0PD08 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms