Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pdlim1O70400 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14□□□□□ -0.17
Pdlim1O70400 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Pdlim1O70400 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pdlim1O70400 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pdlim1O70400 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Gm8584-201ENSMUST00000171982 758 ntBASIC14□□□□□ -0.17
Pdlim1O70400 Mir7023-201ENSMUST00000185093 64 ntBASIC14□□□□□ -0.17
Pdlim1O70400 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14□□□□□ -0.17
Pdlim1O70400 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Pdlim1O70400 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pdlim1O70400 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pdlim1O70400 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14□□□□□ -0.17
Pdlim1O70400 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pdlim1O70400 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.99□□□□□ -0.17
Pdlim1O70400 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.99□□□□□ -0.17
Pdlim1O70400 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.99□□□□□ -0.17
Pdlim1O70400 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.99□□□□□ -0.17
Pdlim1O70400 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pdlim1O70400 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Gm7775-201ENSMUST00000218871 853 ntBASIC13.99□□□□□ -0.17
Pdlim1O70400 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pdlim1O70400 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.99□□□□□ -0.17
Pdlim1O70400 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.99□□□□□ -0.17
Pdlim1O70400 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.99□□□□□ -0.17
Pdlim1O70400 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Pdlim1O70400 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pdlim1O70400 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pdlim1O70400 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.98□□□□□ -0.17
Pdlim1O70400 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Pdlim1O70400 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Gm15460-201ENSMUST00000118147 391 ntBASIC13.98□□□□□ -0.17
Pdlim1O70400 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.98□□□□□ -0.17
Pdlim1O70400 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.98□□□□□ -0.17
Pdlim1O70400 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.98□□□□□ -0.17
Pdlim1O70400 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pdlim1O70400 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.98□□□□□ -0.17
Pdlim1O70400 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pdlim1O70400 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.97□□□□□ -0.17
Pdlim1O70400 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim1O70400 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim1O70400 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pdlim1O70400 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms