Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh17E9PXF0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh17E9PXF0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh17E9PXF0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh17E9PXF0 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Gm12859-201ENSMUST00000117834 427 ntBASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Gm10275-202ENSMUST00000168697 495 ntBASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Gm10275-201ENSMUST00000092620 635 ntBASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdh17E9PXF0 BC001981-202ENSMUST00000191393 1545 ntBASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Gm22189-201ENSMUST00000103822 86 ntBASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Gm9522-201ENSMUST00000182394 926 ntBASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh17E9PXF0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdh17E9PXF0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms