Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB6Q9Y5F9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB6Q9Y5F9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB6Q9Y5F9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGB6Q9Y5F9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGB6Q9Y5F9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 AC148477.8-201ENST00000624298 468 ntBASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 FAM215A-202ENST00000632077 792 ntBASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGB6Q9Y5F9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 PCDHB19P-201ENST00000570871 2371 ntBASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 DDX43P3-201ENST00000441064 443 ntBASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 AP000867.4-201ENST00000641616 219 ntBASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 AF228730.7-201ENST00000641842 219 ntBASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHGB6Q9Y5F9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB6Q9Y5F9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB6Q9Y5F9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB6Q9Y5F9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
PCDHGB6Q9Y5F9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB6Q9Y5F9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDHGB6Q9Y5F9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB6Q9Y5F9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB6Q9Y5F9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHGB6Q9Y5F9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHGB6Q9Y5F9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
PCDHGB6Q9Y5F9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGB6Q9Y5F9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB6Q9Y5F9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGB6Q9Y5F9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB6Q9Y5F9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB6Q9Y5F9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB6Q9Y5F9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGB6Q9Y5F9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB6Q9Y5F9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB6Q9Y5F9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PCDHGB6Q9Y5F9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms