Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 FAAHP1-202ENST00000446499 1238 ntBASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 FGFR3P6-201ENST00000457012 610 ntBASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 AL355877.3-201ENST00000622820 899 ntBASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 PMPCAP1-201ENST00000508114 1576 ntBASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 AL353593.2-201ENST00000602529 1483 ntBASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 RBM17P3-201ENST00000417687 1192 ntBASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 AC005104.2-201ENST00000427818 678 ntBASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 AC104692.2-201ENST00000603054 253 ntBASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 AL121912.1-201ENST00000603683 238 ntBASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 AC073592.5-201ENST00000624854 528 ntBASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 UBALD1-205ENST00000590891 2641 ntBASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NECTIN3Q9NQS3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms