Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 AC087388.1-201ENST00000571370 1112 ntBASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 AC090616.6-201ENST00000582640 721 ntBASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 AL590326.2-201ENST00000625139 305 ntBASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 AC010460.3-201ENST00000511359 1579 ntBASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CHRDL1Q9BU40 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 MIR1224-201ENST00000408193 85 ntBASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 AL845331.1-201ENST00000424978 1190 ntBASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 BX276092.5-203ENST00000456199 560 ntBASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHRDL1Q9BU40 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 AC097374.2-201ENST00000618617 1306 ntBASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHRDL1Q9BU40 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms