Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Samm50Q8BGH2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Gm43125-201ENSMUST00000201724 730 ntBASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Samm50Q8BGH2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.64■□□□□ 0.26
Samm50Q8BGH2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Samm50Q8BGH2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Gm8749-201ENSMUST00000117737 331 ntBASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Gm15483-201ENSMUST00000120338 456 ntBASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Gm43474-201ENSMUST00000196415 774 ntBASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Gm5312-201ENSMUST00000203728 547 ntBASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Samm50Q8BGH2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Gm13464-201ENSMUST00000119418 935 ntBASIC16.62■□□□□ 0.25
Samm50Q8BGH2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms