Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.06□□□□□ -0.32
VcanQ62059 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.06□□□□□ -0.32
VcanQ62059 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
VcanQ62059 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
VcanQ62059 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VcanQ62059 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
VcanQ62059 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VcanQ62059 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.05□□□□□ -0.32
VcanQ62059 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Gm4986-201ENSMUST00000119731 549 ntBASIC13.05□□□□□ -0.32
VcanQ62059 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
VcanQ62059 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
VcanQ62059 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.05□□□□□ -0.32
VcanQ62059 Gm45219-201ENSMUST00000205602 465 ntBASIC13.05□□□□□ -0.32
VcanQ62059 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.05□□□□□ -0.32
VcanQ62059 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.05□□□□□ -0.32
VcanQ62059 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.05□□□□□ -0.32
VcanQ62059 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
VcanQ62059 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.05□□□□□ -0.32
VcanQ62059 Gm9540-201ENSMUST00000188230 478 ntBASIC13.05□□□□□ -0.32
VcanQ62059 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VcanQ62059 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VcanQ62059 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.04□□□□□ -0.32
VcanQ62059 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
VcanQ62059 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.04□□□□□ -0.32
VcanQ62059 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.04□□□□□ -0.32
VcanQ62059 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.04□□□□□ -0.32
VcanQ62059 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Gm21470-201ENSMUST00000187680 696 ntBASIC13.04□□□□□ -0.32
VcanQ62059 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.04□□□□□ -0.32
VcanQ62059 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.04□□□□□ -0.32
VcanQ62059 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
VcanQ62059 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.04□□□□□ -0.32
VcanQ62059 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.04□□□□□ -0.32
VcanQ62059 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VcanQ62059 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Gm12616-201ENSMUST00000118594 382 ntBASIC13.03□□□□□ -0.32
VcanQ62059 Gm11331-201ENSMUST00000119764 288 ntBASIC13.03□□□□□ -0.32
VcanQ62059 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.03□□□□□ -0.32
VcanQ62059 Gm12624-201ENSMUST00000177615 382 ntBASIC13.03□□□□□ -0.32
VcanQ62059 Gm12621-201ENSMUST00000177760 382 ntBASIC13.03□□□□□ -0.32
VcanQ62059 Gm12615-201ENSMUST00000177970 382 ntBASIC13.03□□□□□ -0.32
VcanQ62059 Gm12622-201ENSMUST00000177975 382 ntBASIC13.03□□□□□ -0.32
VcanQ62059 Gm12627-201ENSMUST00000178412 382 ntBASIC13.03□□□□□ -0.32
VcanQ62059 Gm12625-201ENSMUST00000179122 382 ntBASIC13.03□□□□□ -0.32
VcanQ62059 Gm12614-201ENSMUST00000179586 382 ntBASIC13.03□□□□□ -0.32
VcanQ62059 Gm12613-201ENSMUST00000180323 382 ntBASIC13.03□□□□□ -0.32
VcanQ62059 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.03□□□□□ -0.32
VcanQ62059 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.03□□□□□ -0.32
VcanQ62059 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
VcanQ62059 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
VcanQ62059 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.03□□□□□ -0.32
VcanQ62059 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
VcanQ62059 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VcanQ62059 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms