Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.06■□□□□ 0
Trim43aQ3TL54 Gm27300-201ENSMUST00000184085 97 ntBASIC15.06■□□□□ 0
Trim43aQ3TL54 Gm27335-201ENSMUST00000184758 97 ntBASIC15.06■□□□□ 0
Trim43aQ3TL54 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.06■□□□□ 0
Trim43aQ3TL54 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.06■□□□□ 0
Trim43aQ3TL54 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.06■□□□□ 0
Trim43aQ3TL54 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.06■□□□□ 0
Trim43aQ3TL54 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.06■□□□□ 0
Trim43aQ3TL54 Gm10154-201ENSMUST00000084445 354 ntBASIC15.06■□□□□ 0
Trim43aQ3TL54 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trim43aQ3TL54 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.06■□□□□ 0
Trim43aQ3TL54 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim43aQ3TL54 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim43aQ3TL54 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim43aQ3TL54 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43aQ3TL54 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43aQ3TL54 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43aQ3TL54 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43aQ3TL54 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43aQ3TL54 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trim43aQ3TL54 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43aQ3TL54 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trim43aQ3TL54 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43aQ3TL54 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trim43aQ3TL54 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43aQ3TL54 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43aQ3TL54 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim43aQ3TL54 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.05■□□□□ -0
Trim43aQ3TL54 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Trim43aQ3TL54 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.05■□□□□ -0
Trim43aQ3TL54 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
Trim43aQ3TL54 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.05■□□□□ -0
Trim43aQ3TL54 Gm5264-201ENSMUST00000190584 848 ntBASIC15.05■□□□□ -0
Trim43aQ3TL54 Gm2213-201ENSMUST00000197485 688 ntBASIC15.05■□□□□ -0
Trim43aQ3TL54 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Trim43aQ3TL54 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.05■□□□□ -0
Trim43aQ3TL54 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.05■□□□□ -0
Trim43aQ3TL54 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Trim43aQ3TL54 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trim43aQ3TL54 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.05■□□□□ -0
Trim43aQ3TL54 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trim43aQ3TL54 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim43aQ3TL54 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.04■□□□□ -0
Trim43aQ3TL54 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.04■□□□□ -0
Trim43aQ3TL54 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trim43aQ3TL54 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim43aQ3TL54 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trim43aQ3TL54 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Gm11779-201ENSMUST00000118541 368 ntBASIC15.04■□□□□ -0
Trim43aQ3TL54 Gm10275-202ENSMUST00000168697 495 ntBASIC15.04■□□□□ -0
Trim43aQ3TL54 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.04■□□□□ -0
Trim43aQ3TL54 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Gm10275-201ENSMUST00000092620 635 ntBASIC15.04■□□□□ -0
Trim43aQ3TL54 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms