Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.51□□□□□ -0.57
P04940 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.51□□□□□ -0.57
P04940 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
P04940 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.51□□□□□ -0.57
P04940 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
P04940 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.51□□□□□ -0.57
P04940 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.51□□□□□ -0.57
P04940 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
P04940 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
P04940 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.51□□□□□ -0.57
P04940 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.51□□□□□ -0.57
P04940 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
P04940 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.51□□□□□ -0.57
P04940 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.51□□□□□ -0.57
P04940 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
P04940 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.51□□□□□ -0.57
P04940 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04940 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.5□□□□□ -0.57
P04940 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Gm24543-201ENSMUST00000103867 82 ntBASIC11.5□□□□□ -0.57
P04940 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Gm6415-201ENSMUST00000118488 348 ntBASIC11.5□□□□□ -0.57
P04940 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.5□□□□□ -0.57
P04940 Gm26308-201ENSMUST00000157768 69 ntBASIC11.5□□□□□ -0.57
P04940 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.5□□□□□ -0.57
P04940 Gm43575-201ENSMUST00000196420 516 ntBASIC11.5□□□□□ -0.57
P04940 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
P04940 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
P04940 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
P04940 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04940 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
P04940 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04940 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04940 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04940 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
P04940 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04940 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
P04940 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04940 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04940 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04940 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.49□□□□□ -0.57
P04940 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04940 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04940 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04940 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04940 Gm15653-201ENSMUST00000119247 907 ntBASIC11.49□□□□□ -0.57
P04940 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.49□□□□□ -0.57
P04940 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
P04940 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.49□□□□□ -0.57
P04940 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms