Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh1F7BJK1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh1F7BJK1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Pcdh1F7BJK1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh1F7BJK1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh1F7BJK1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh1F7BJK1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh1F7BJK1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh1F7BJK1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pcdh1F7BJK1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh1F7BJK1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh1F7BJK1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Gm25925-201ENSMUST00000158314 306 ntBASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Gm18733-201ENSMUST00000173950 856 ntBASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Mir5126-201ENSMUST00000175513 77 ntBASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Gm2651-201ENSMUST00000203560 838 ntBASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh1F7BJK1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh1F7BJK1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms