Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.39□□□□□ -0.27
Chaf1bQ9D0N7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chaf1bQ9D0N7 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Gm4899-201ENSMUST00000178708 719 ntBASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chaf1bQ9D0N7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Gm14042-201ENSMUST00000120139 833 ntBASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chaf1bQ9D0N7 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms