Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd1lQ9CXF7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd1lQ9CXF7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Gm25990-201ENSMUST00000102440 86 ntBASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chd1lQ9CXF7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Gm4899-201ENSMUST00000178708 719 ntBASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd1lQ9CXF7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Gm37230-201ENSMUST00000194491 818 ntBASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd1lQ9CXF7 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.05■□□□□ 0.16
Chd1lQ9CXF7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms