Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXP3Q9BZS1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXP3Q9BZS1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.77■□□□□ 0.43
FOXP3Q9BZS1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
FOXP3Q9BZS1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXP3Q9BZS1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
FOXP3Q9BZS1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXP3Q9BZS1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
FOXP3Q9BZS1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 AC010460.3-201ENST00000511359 1579 ntBASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 AP000347.1-202ENST00000435868 847 ntBASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 AC104819.1-201ENST00000504587 486 ntBASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 AC074051.2-201ENST00000565115 352 ntBASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 AC090616.6-201ENST00000582640 721 ntBASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 AL031008.1-201ENST00000619963 541 ntBASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 DOC2GP-204ENST00000639052 2548 ntBASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.76■□□□□ 0.43
FOXP3Q9BZS1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 AC078925.2-201ENST00000624013 1973 ntBASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 KRT18P31-201ENST00000506277 1292 ntBASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 LINC01711-201ENST00000598340 967 ntBASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 AC019129.2-201ENST00000609837 1235 ntBASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 UBALD1-205ENST00000590891 2641 ntBASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXP3Q9BZS1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXP3Q9BZS1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms