Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm2451-201ENSMUST00000199447 999 ntBASIC13.47□□□□□ -0.25
Chmp1b1Q99LU0 Gm10290-201ENSMUST00000200451 999 ntBASIC13.47□□□□□ -0.25
Chmp1b1Q99LU0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1b1Q99LU0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1b1Q99LU0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chmp1b1Q99LU0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1b1Q99LU0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1b1Q99LU0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chmp1b1Q99LU0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1b1Q99LU0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1b1Q99LU0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1b1Q99LU0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chmp1b1Q99LU0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp1b1Q99LU0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Gm8749-201ENSMUST00000117737 331 ntBASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Rpph1-201ENSMUST00000175096 319 ntBASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Gm9182-201ENSMUST00000217829 639 ntBASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Gm10175-201ENSMUST00000086013 645 ntBASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp1b1Q99LU0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp1b1Q99LU0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Chmp1b1Q99LU0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Chmp1b1Q99LU0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp1b1Q99LU0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp1b1Q99LU0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp1b1Q99LU0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp1b1Q99LU0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Gm12134-201ENSMUST00000122109 520 ntBASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.45□□□□□ -0.26
Chmp1b1Q99LU0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms