Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 AC002558.1-201ENST00000488906 803 ntBASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 AC112191.1-201ENST00000523689 701 ntBASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 AL590787.1-201ENST00000568856 1315 ntBASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC46A1Q96NT5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 ACTG1P4-201ENST00000425123 1122 ntBASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 FAM86GP-201ENST00000448322 971 ntBASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 AC138761.1-201ENST00000584393 385 ntBASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 AC005498.2-205ENST00000593218 784 ntBASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SLC46A1Q96NT5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.39■□□□□ 0.22
SLC46A1Q96NT5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 AL513480.1-201ENST00000451731 511 ntBASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 MIR4745-201ENST00000577608 62 ntBASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 REXO1L11P-201ENST00000620964 1927 ntBASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC46A1Q96NT5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 AC092919.2-201ENST00000623631 1645 ntBASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms