Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh18Q8VHR0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Gm28659-201ENSMUST00000188013 759 ntBASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Gm10060-201ENSMUST00000212002 111 ntBASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh18Q8VHR0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 AV026068-213ENSMUST00000223675 1171 ntBASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh18Q8VHR0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms