Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp248Q640N4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp248Q640N4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp248Q640N4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp248Q640N4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Zfp248Q640N4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Gm11543-201ENSMUST00000120758 370 ntBASIC10.82□□□□□ -0.68
Zfp248Q640N4 Gm12260-201ENSMUST00000122447 411 ntBASIC10.82□□□□□ -0.68
Zfp248Q640N4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Gm17271-201ENSMUST00000165535 355 ntBASIC10.82□□□□□ -0.68
Zfp248Q640N4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Rpph1-201ENSMUST00000175096 319 ntBASIC10.82□□□□□ -0.68
Zfp248Q640N4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.82□□□□□ -0.68
Zfp248Q640N4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Zfp248Q640N4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.81□□□□□ -0.68
Zfp248Q640N4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.81□□□□□ -0.68
Zfp248Q640N4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.81□□□□□ -0.68
Zfp248Q640N4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.81□□□□□ -0.68
Zfp248Q640N4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.81□□□□□ -0.68
Zfp248Q640N4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.81□□□□□ -0.68
Zfp248Q640N4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Gm43399-201ENSMUST00000202546 2374 ntBASIC10.81□□□□□ -0.68
Zfp248Q640N4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Zfp248Q640N4 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Zfp248Q640N4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms