Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Gm5566-201ENSMUST00000116118 459 ntBASIC13.14□□□□□ -0.31
Col10a1Q05306 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.14□□□□□ -0.31
Col10a1Q05306 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col10a1Q05306 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col10a1Q05306 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col10a1Q05306 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col10a1Q05306 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col10a1Q05306 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col10a1Q05306 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col10a1Q05306 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col10a1Q05306 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col10a1Q05306 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Col10a1Q05306 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Col10a1Q05306 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col10a1Q05306 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col10a1Q05306 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.13□□□□□ -0.31
Col10a1Q05306 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col10a1Q05306 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.13□□□□□ -0.31
Col10a1Q05306 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.13□□□□□ -0.31
Col10a1Q05306 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col10a1Q05306 Gm27631-201ENSMUST00000184163 466 ntBASIC13.13□□□□□ -0.31
Col10a1Q05306 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Col10a1Q05306 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col10a1Q05306 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Col10a1Q05306 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.12□□□□□ -0.31
Col10a1Q05306 Gm28630-201ENSMUST00000187806 498 ntBASIC13.12□□□□□ -0.31
Col10a1Q05306 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.12□□□□□ -0.31
Col10a1Q05306 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.12□□□□□ -0.31
Col10a1Q05306 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.12□□□□□ -0.31
Col10a1Q05306 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.12□□□□□ -0.31
Col10a1Q05306 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.12□□□□□ -0.31
Col10a1Q05306 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.12□□□□□ -0.31
Col10a1Q05306 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col10a1Q05306 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.12□□□□□ -0.31
Col10a1Q05306 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.12□□□□□ -0.31
Col10a1Q05306 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col10a1Q05306 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col10a1Q05306 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col10a1Q05306 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Col10a1Q05306 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.11□□□□□ -0.31
Col10a1Q05306 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Gm27622-201ENSMUST00000183779 60 ntBASIC13.11□□□□□ -0.31
Col10a1Q05306 Gm45453-201ENSMUST00000211758 853 ntBASIC13.11□□□□□ -0.31
Col10a1Q05306 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.11□□□□□ -0.31
Col10a1Q05306 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col10a1Q05306 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.11□□□□□ -0.31
Col10a1Q05306 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.11□□□□□ -0.31
Col10a1Q05306 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col10a1Q05306 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col10a1Q05306 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms