Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
VSX2P58304 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VSX2P58304 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.46■□□□□ 0.23
VSX2P58304 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 PTCHD3P3-201ENST00000403073 906 ntBASIC16.46■□□□□ 0.23
VSX2P58304 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.46■□□□□ 0.23
VSX2P58304 RPS15P9-201ENST00000494093 319 ntBASIC16.46■□□□□ 0.23
VSX2P58304 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.46■□□□□ 0.23
VSX2P58304 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.46■□□□□ 0.23
VSX2P58304 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
VSX2P58304 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.46■□□□□ 0.23
VSX2P58304 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.46■□□□□ 0.23
VSX2P58304 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 ZNF259P1-201ENST00000407656 1365 ntBASIC16.46■□□□□ 0.23
VSX2P58304 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
VSX2P58304 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VSX2P58304 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.46■□□□□ 0.23
VSX2P58304 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.46■□□□□ 0.23
VSX2P58304 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
VSX2P58304 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VSX2P58304 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.46■□□□□ 0.22
VSX2P58304 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
VSX2P58304 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VSX2P58304 PRORSD1P-202ENST00000563365 2154 ntBASIC16.45■□□□□ 0.22
VSX2P58304 AL590787.1-201ENST00000568856 1315 ntBASIC16.45■□□□□ 0.22
VSX2P58304 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VSX2P58304 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.45■□□□□ 0.22
VSX2P58304 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSX2P58304 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSX2P58304 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VSX2P58304 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSX2P58304 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VSX2P58304 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.45■□□□□ 0.22
VSX2P58304 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VSX2P58304 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSX2P58304 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSX2P58304 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.45■□□□□ 0.22
VSX2P58304 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.45■□□□□ 0.22
VSX2P58304 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VSX2P58304 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.45■□□□□ 0.22
VSX2P58304 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VSX2P58304 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.45■□□□□ 0.22
VSX2P58304 AC106730.1-201ENST00000566722 1090 ntBASIC16.45■□□□□ 0.22
VSX2P58304 Z83851.2-201ENST00000609564 659 ntBASIC16.45■□□□□ 0.22
VSX2P58304 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
VSX2P58304 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.45■□□□□ 0.22
VSX2P58304 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.45■□□□□ 0.22
VSX2P58304 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSX2P58304 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSX2P58304 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
VSX2P58304 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSX2P58304 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSX2P58304 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VSX2P58304 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.45■□□□□ 0.22
VSX2P58304 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.44■□□□□ 0.22
VSX2P58304 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.44■□□□□ 0.22
VSX2P58304 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.44■□□□□ 0.22
VSX2P58304 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.44■□□□□ 0.22
VSX2P58304 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VSX2P58304 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.44■□□□□ 0.22
VSX2P58304 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.44■□□□□ 0.22
VSX2P58304 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.44■□□□□ 0.22
VSX2P58304 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 AC108751.1-201ENST00000490852 363 ntBASIC16.44■□□□□ 0.22
VSX2P58304 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.44■□□□□ 0.22
VSX2P58304 AC145285.3-201ENST00000564603 959 ntBASIC16.44■□□□□ 0.22
VSX2P58304 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.44■□□□□ 0.22
VSX2P58304 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 AL805961.1-202ENST00000641562 540 ntBASIC16.44■□□□□ 0.22
VSX2P58304 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.44■□□□□ 0.22
VSX2P58304 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VSX2P58304 AC016396.2-201ENST00000562575 1417 ntBASIC16.44■□□□□ 0.22
VSX2P58304 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms