Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.16□□□□□ -0.3
Thbs1P35441 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.16□□□□□ -0.3
Thbs1P35441 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Thbs1P35441 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Thbs1P35441 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.15□□□□□ -0.3
Thbs1P35441 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Thbs1P35441 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.15□□□□□ -0.3
Thbs1P35441 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Thbs1P35441 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.15□□□□□ -0.3
Thbs1P35441 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.15□□□□□ -0.3
Thbs1P35441 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.15□□□□□ -0.3
Thbs1P35441 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Thbs1P35441 Gm29310-201ENSMUST00000185468 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21825-201ENSMUST00000185728 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm29109-201ENSMUST00000185895 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21896-201ENSMUST00000186520 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21873-201ENSMUST00000186728 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21794-201ENSMUST00000187056 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21880-201ENSMUST00000187275 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21826-201ENSMUST00000187451 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21198-201ENSMUST00000188393 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21749-201ENSMUST00000189343 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21901-201ENSMUST00000189568 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm29424-201ENSMUST00000189716 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm28599-201ENSMUST00000189838 694 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21867-201ENSMUST00000189917 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm29269-201ENSMUST00000190087 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21722-201ENSMUST00000190153 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm28423-201ENSMUST00000190701 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21899-201ENSMUST00000190745 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21910-201ENSMUST00000191163 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21849-201ENSMUST00000191571 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm28678-201ENSMUST00000191593 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm20910-201ENSMUST00000193268 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm21871-201ENSMUST00000194621 696 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Gm44608-201ENSMUST00000206827 855 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.15□□□□□ -0.3
Thbs1P35441 Gm8396-201ENSMUST00000057361 823 ntBASIC13.15□□□□□ -0.3
Thbs1P35441 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Thbs1P35441 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Thbs1P35441 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Thbs1P35441 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Thbs1P35441 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.14□□□□□ -0.31
Thbs1P35441 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Thbs1P35441 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.14□□□□□ -0.31
Thbs1P35441 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.14□□□□□ -0.31
Thbs1P35441 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Thbs1P35441 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Thbs1P35441 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Thbs1P35441 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.14□□□□□ -0.31
Thbs1P35441 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Thbs1P35441 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Thbs1P35441 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Thbs1P35441 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thbs1P35441 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thbs1P35441 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thbs1P35441 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms