Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSBP07858 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSBP07858 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.22■□□□□ 0.19
CTSBP07858 MCCD1P2-201ENST00000423228 335 ntBASIC16.22■□□□□ 0.19
CTSBP07858 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.22■□□□□ 0.19
CTSBP07858 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.22■□□□□ 0.19
CTSBP07858 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.22■□□□□ 0.19
CTSBP07858 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CTSBP07858 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CTSBP07858 DUX4L17-201ENST00000557360 1267 ntBASIC16.22■□□□□ 0.19
CTSBP07858 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.22■□□□□ 0.19
CTSBP07858 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CTSBP07858 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.22■□□□□ 0.19
CTSBP07858 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTSBP07858 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.22■□□□□ 0.19
CTSBP07858 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSBP07858 AL078644.1-201ENST00000609881 752 ntBASIC16.22■□□□□ 0.19
CTSBP07858 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSBP07858 FRMD8P1-201ENST00000440433 1524 ntBASIC16.22■□□□□ 0.19
CTSBP07858 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSBP07858 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTSBP07858 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSBP07858 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CTSBP07858 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CTSBP07858 AC092919.2-201ENST00000623631 1645 ntBASIC16.22■□□□□ 0.19
CTSBP07858 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CTSBP07858 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.22■□□□□ 0.19
CTSBP07858 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CTSBP07858 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CTSBP07858 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSBP07858 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSBP07858 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSBP07858 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CTSBP07858 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSBP07858 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CTSBP07858 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTSBP07858 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSBP07858 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CTSBP07858 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSBP07858 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.21■□□□□ 0.19
CTSBP07858 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CTSBP07858 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.21■□□□□ 0.19
CTSBP07858 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.21■□□□□ 0.19
CTSBP07858 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.21■□□□□ 0.19
CTSBP07858 PDPK2P-202ENST00000562415 1191 ntBASIC16.21■□□□□ 0.19
CTSBP07858 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.21■□□□□ 0.19
CTSBP07858 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CTSBP07858 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSBP07858 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CTSBP07858 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSBP07858 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTSBP07858 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSBP07858 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSBP07858 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTSBP07858 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CTSBP07858 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.21■□□□□ 0.18
CTSBP07858 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CTSBP07858 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.2■□□□□ 0.18
CTSBP07858 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CTSBP07858 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.2■□□□□ 0.18
CTSBP07858 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTSBP07858 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CTSBP07858 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.2■□□□□ 0.18
CTSBP07858 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.2■□□□□ 0.18
CTSBP07858 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.2■□□□□ 0.18
CTSBP07858 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.2■□□□□ 0.18
CTSBP07858 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.2■□□□□ 0.18
CTSBP07858 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.2■□□□□ 0.18
CTSBP07858 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.2■□□□□ 0.18
CTSBP07858 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CTSBP07858 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CTSBP07858 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.2■□□□□ 0.18
CTSBP07858 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
CTSBP07858 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.2■□□□□ 0.18
CTSBP07858 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CTSBP07858 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTSBP07858 AC092068.3-201ENST00000587894 2016 ntBASIC16.19■□□□□ 0.18
CTSBP07858 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTSBP07858 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSBP07858 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSBP07858 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSBP07858 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTSBP07858 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms