Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Syce3B5KM66 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Syce3B5KM66 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Syce3B5KM66 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.3■□□□□ 0.2
Syce3B5KM66 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Gm45167-201ENSMUST00000208007 322 ntBASIC16.3■□□□□ 0.2
Syce3B5KM66 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Syce3B5KM66 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Syce3B5KM66 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Syce3B5KM66 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Syce3B5KM66 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Syce3B5KM66 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.29■□□□□ 0.2
Syce3B5KM66 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.29■□□□□ 0.2
Syce3B5KM66 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.29■□□□□ 0.2
Syce3B5KM66 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Syce3B5KM66 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Syce3B5KM66 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syce3B5KM66 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Syce3B5KM66 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syce3B5KM66 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syce3B5KM66 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syce3B5KM66 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syce3B5KM66 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Syce3B5KM66 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Syce3B5KM66 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syce3B5KM66 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syce3B5KM66 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Syce3B5KM66 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syce3B5KM66 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Syce3B5KM66 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syce3B5KM66 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syce3B5KM66 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Syce3B5KM66 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.28■□□□□ 0.2
Syce3B5KM66 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Syce3B5KM66 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syce3B5KM66 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syce3B5KM66 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syce3B5KM66 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.27■□□□□ 0.2
Syce3B5KM66 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.27■□□□□ 0.2
Syce3B5KM66 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Syce3B5KM66 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Syce3B5KM66 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syce3B5KM66 Gm25990-201ENSMUST00000102440 86 ntBASIC16.27■□□□□ 0.2
Syce3B5KM66 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syce3B5KM66 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Syce3B5KM66 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.27■□□□□ 0.2
Syce3B5KM66 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.27■□□□□ 0.2
Syce3B5KM66 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Syce3B5KM66 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syce3B5KM66 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syce3B5KM66 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syce3B5KM66 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Syce3B5KM66 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Syce3B5KM66 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Syce3B5KM66 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Syce3B5KM66 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Syce3B5KM66 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms