Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
HFM1A2PYH4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HFM1A2PYH4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
HFM1A2PYH4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HFM1A2PYH4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 AC027612.4-201ENST00000605371 583 ntBASIC25.18■■□□□ 1.62
HFM1A2PYH4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 AL513210.1-201ENST00000629608 234 ntBASIC25.18■■□□□ 1.62
HFM1A2PYH4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC25.18■■□□□ 1.62
HFM1A2PYH4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HFM1A2PYH4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
HFM1A2PYH4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
HFM1A2PYH4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HFM1A2PYH4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC25.17■■□□□ 1.62
HFM1A2PYH4 SNX33P1-201ENST00000592116 1762 ntBASIC25.17■■□□□ 1.62
HFM1A2PYH4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
HFM1A2PYH4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
HFM1A2PYH4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
HFM1A2PYH4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
HFM1A2PYH4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC25.17■■□□□ 1.62
HFM1A2PYH4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
HFM1A2PYH4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
HFM1A2PYH4 CD82-202ENST00000342935 967 ntTSL 5 BASIC25.17■■□□□ 1.62
HFM1A2PYH4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC25.17■■□□□ 1.62
HFM1A2PYH4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC25.17■■□□□ 1.62
HFM1A2PYH4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
HFM1A2PYH4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
HFM1A2PYH4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC25.17■■□□□ 1.62
HFM1A2PYH4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC25.16■■□□□ 1.62
HFM1A2PYH4 AC005332.8-201ENST00000622750 2735 ntBASIC25.16■■□□□ 1.62
HFM1A2PYH4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC25.16■■□□□ 1.62
HFM1A2PYH4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
HFM1A2PYH4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
HFM1A2PYH4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
HFM1A2PYH4 AP001094.4-201ENST00000579008 2176 ntBASIC25.16■■□□□ 1.62
HFM1A2PYH4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC25.16■■□□□ 1.62
HFM1A2PYH4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC25.16■■□□□ 1.62
HFM1A2PYH4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC25.16■■□□□ 1.62
HFM1A2PYH4 NMU-203ENST00000507338 658 ntTSL 3 BASIC25.16■■□□□ 1.62
HFM1A2PYH4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC25.16■■□□□ 1.62
HFM1A2PYH4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC25.16■■□□□ 1.62
HFM1A2PYH4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
HFM1A2PYH4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
HFM1A2PYH4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
HFM1A2PYH4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
HFM1A2PYH4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
HFM1A2PYH4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC25.15■■□□□ 1.62
HFM1A2PYH4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
HFM1A2PYH4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
HFM1A2PYH4 AC002056.1-201ENST00000395613 760 ntBASIC25.15■■□□□ 1.62
HFM1A2PYH4 AC254562.1-201ENST00000417586 456 ntBASIC25.15■■□□□ 1.62
HFM1A2PYH4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC25.15■■□□□ 1.62
HFM1A2PYH4 AP000344.2-201ENST00000512987 629 ntBASIC25.15■■□□□ 1.62
HFM1A2PYH4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC25.15■■□□□ 1.62
HFM1A2PYH4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC25.15■■□□□ 1.62
HFM1A2PYH4 AC027796.2-201ENST00000575326 344 ntBASIC25.15■■□□□ 1.62
HFM1A2PYH4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC25.15■■□□□ 1.62
HFM1A2PYH4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC25.15■■□□□ 1.62
HFM1A2PYH4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC25.15■■□□□ 1.62
HFM1A2PYH4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
HFM1A2PYH4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
HFM1A2PYH4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
HFM1A2PYH4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
HFM1A2PYH4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
HFM1A2PYH4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
HFM1A2PYH4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
HFM1A2PYH4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
HFM1A2PYH4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC25.15■■□□□ 1.62
HFM1A2PYH4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
HFM1A2PYH4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
HFM1A2PYH4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
HFM1A2PYH4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms