Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.48□□□□□ -0.41
Slc5a7Q8BGY9 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc5a7Q8BGY9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Slc5a7Q8BGY9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Slc5a7Q8BGY9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Slc5a7Q8BGY9 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.46□□□□□ -0.42
Slc5a7Q8BGY9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Slc5a7Q8BGY9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms