Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCLP18206 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCLP18206 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCLP18206 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCLP18206 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCLP18206 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.37■□□□□ 0.37
VCLP18206 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCLP18206 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCLP18206 RBM17P3-201ENST00000417687 1192 ntBASIC17.37■□□□□ 0.37
VCLP18206 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.37■□□□□ 0.37
VCLP18206 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.37■□□□□ 0.37
VCLP18206 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.37■□□□□ 0.37
VCLP18206 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.37■□□□□ 0.37
VCLP18206 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.37■□□□□ 0.37
VCLP18206 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCLP18206 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.37■□□□□ 0.37
VCLP18206 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.37■□□□□ 0.37
VCLP18206 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.37■□□□□ 0.37
VCLP18206 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.37■□□□□ 0.37
VCLP18206 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
VCLP18206 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCLP18206 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.37■□□□□ 0.37
VCLP18206 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.37■□□□□ 0.37
VCLP18206 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCLP18206 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.37■□□□□ 0.37
VCLP18206 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VCLP18206 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.37■□□□□ 0.37
VCLP18206 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCLP18206 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
VCLP18206 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VCLP18206 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
VCLP18206 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.36■□□□□ 0.37
VCLP18206 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCLP18206 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCLP18206 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCLP18206 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCLP18206 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCLP18206 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.36■□□□□ 0.37
VCLP18206 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
VCLP18206 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCLP18206 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.36■□□□□ 0.37
VCLP18206 ABCD1P5-201ENST00000445663 754 ntBASIC17.36■□□□□ 0.37
VCLP18206 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCLP18206 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.36■□□□□ 0.37
VCLP18206 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
VCLP18206 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.36■□□□□ 0.37
VCLP18206 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VCLP18206 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCLP18206 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.36■□□□□ 0.37
VCLP18206 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VCLP18206 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.36■□□□□ 0.37
VCLP18206 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VCLP18206 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
VCLP18206 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VCLP18206 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VCLP18206 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VCLP18206 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.35■□□□□ 0.37
VCLP18206 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VCLP18206 REXO1L11P-201ENST00000620964 1927 ntBASIC17.35■□□□□ 0.37
VCLP18206 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.35■□□□□ 0.37
VCLP18206 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.35■□□□□ 0.37
VCLP18206 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.35■□□□□ 0.37
VCLP18206 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.35■□□□□ 0.37
VCLP18206 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.35■□□□□ 0.37
VCLP18206 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.35■□□□□ 0.37
VCLP18206 EMBP1-201ENST00000458200 901 ntBASIC17.35■□□□□ 0.37
VCLP18206 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.35■□□□□ 0.37
VCLP18206 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.35■□□□□ 0.37
VCLP18206 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.35■□□□□ 0.37
VCLP18206 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.35■□□□□ 0.37
VCLP18206 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.35■□□□□ 0.37
VCLP18206 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.35■□□□□ 0.37
VCLP18206 AL138688.1-201ENST00000624851 1594 ntBASIC17.35■□□□□ 0.37
VCLP18206 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
VCLP18206 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.35■□□□□ 0.37
VCLP18206 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VCLP18206 PCDHB19P-201ENST00000570871 2371 ntBASIC17.35■□□□□ 0.37
VCLP18206 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VCLP18206 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
VCLP18206 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VCLP18206 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VCLP18206 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms