Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.34■□□□□ 0.69
COL11A1P12107 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.34■□□□□ 0.69
COL11A1P12107 AC092364.2-202ENST00000597012 1073 ntBASIC19.34■□□□□ 0.69
COL11A1P12107 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.34■□□□□ 0.69
COL11A1P12107 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.34■□□□□ 0.69
COL11A1P12107 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL11A1P12107 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.34■□□□□ 0.69
COL11A1P12107 AC016027.1-202ENST00000607927 1699 ntBASIC19.34■□□□□ 0.69
COL11A1P12107 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL11A1P12107 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.34■□□□□ 0.69
COL11A1P12107 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.33■□□□□ 0.69
COL11A1P12107 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL11A1P12107 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.33■□□□□ 0.69
COL11A1P12107 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL11A1P12107 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL11A1P12107 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL11A1P12107 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL11A1P12107 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL11A1P12107 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.33■□□□□ 0.69
COL11A1P12107 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.33■□□□□ 0.69
COL11A1P12107 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.33■□□□□ 0.69
COL11A1P12107 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.33■□□□□ 0.69
COL11A1P12107 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.33■□□□□ 0.69
COL11A1P12107 MIR4492-201ENST00000581627 80 ntBASIC19.33■□□□□ 0.69
COL11A1P12107 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.33■□□□□ 0.69
COL11A1P12107 CYP2A7P1-201ENST00000595391 815 ntBASIC19.33■□□□□ 0.69
COL11A1P12107 AL390754.1-201ENST00000619088 582 ntBASIC19.33■□□□□ 0.69
COL11A1P12107 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.33■□□□□ 0.69
COL11A1P12107 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL11A1P12107 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL11A1P12107 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL11A1P12107 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL11A1P12107 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
COL11A1P12107 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL11A1P12107 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL11A1P12107 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL11A1P12107 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL11A1P12107 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.68
COL11A1P12107 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.33■□□□□ 0.68
COL11A1P12107 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 TREML5P-201ENST00000421694 576 ntBASIC19.32■□□□□ 0.68
COL11A1P12107 AC107890.1-201ENST00000422478 521 ntBASIC19.32■□□□□ 0.68
COL11A1P12107 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.32■□□□□ 0.68
COL11A1P12107 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.32■□□□□ 0.68
COL11A1P12107 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.32■□□□□ 0.68
COL11A1P12107 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.32■□□□□ 0.68
COL11A1P12107 AC109635.5-201ENST00000533593 962 ntBASIC19.32■□□□□ 0.68
COL11A1P12107 ALG1L8P-201ENST00000533887 760 ntBASIC19.32■□□□□ 0.68
COL11A1P12107 AC027307.2-201ENST00000591252 911 ntBASIC19.32■□□□□ 0.68
COL11A1P12107 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.32■□□□□ 0.68
COL11A1P12107 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.32■□□□□ 0.68
COL11A1P12107 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.32■□□□□ 0.68
COL11A1P12107 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.32■□□□□ 0.68
COL11A1P12107 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.32■□□□□ 0.68
COL11A1P12107 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.32■□□□□ 0.68
COL11A1P12107 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.32■□□□□ 0.68
COL11A1P12107 AC092474.2-201ENST00000424288 719 ntBASIC19.32■□□□□ 0.68
COL11A1P12107 CNN2P2-201ENST00000443536 909 ntBASIC19.32■□□□□ 0.68
COL11A1P12107 CNN2P3-201ENST00000450201 906 ntBASIC19.32■□□□□ 0.68
COL11A1P12107 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.32■□□□□ 0.68
COL11A1P12107 SLC25A39P2-201ENST00000537614 270 ntBASIC19.32■□□□□ 0.68
COL11A1P12107 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.32■□□□□ 0.68
COL11A1P12107 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.32■□□□□ 0.68
COL11A1P12107 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 AL136317.3-201ENST00000618497 906 ntBASIC19.32■□□□□ 0.68
COL11A1P12107 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL11A1P12107 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL11A1P12107 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL11A1P12107 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL11A1P12107 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL11A1P12107 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL11A1P12107 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
COL11A1P12107 AL021920.2-201ENST00000624828 1351 ntBASIC19.31■□□□□ 0.68
COL11A1P12107 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL11A1P12107 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL11A1P12107 UGT1A2P-201ENST00000454886 866 ntBASIC19.31■□□□□ 0.68
COL11A1P12107 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.31■□□□□ 0.68
COL11A1P12107 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.31■□□□□ 0.68
COL11A1P12107 AC026150.2-201ENST00000564693 1156 ntBASIC19.31■□□□□ 0.68
COL11A1P12107 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL11A1P12107 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.31■□□□□ 0.68
COL11A1P12107 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL11A1P12107 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
COL11A1P12107 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
COL11A1P12107 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL11A1P12107 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL11A1P12107 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL11A1P12107 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL11A1P12107 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms