Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 AC006538.1-201ENST00000567905 1585 ntBASIC18.4■□□□□ 0.54
CEP290O15078 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CEP290O15078 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CEP290O15078 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.4■□□□□ 0.54
CEP290O15078 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CEP290O15078 BANF1P1-201ENST00000553684 263 ntBASIC18.4■□□□□ 0.54
CEP290O15078 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.4■□□□□ 0.54
CEP290O15078 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CEP290O15078 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.4■□□□□ 0.54
CEP290O15078 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CEP290O15078 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.4■□□□□ 0.54
CEP290O15078 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.4■□□□□ 0.54
CEP290O15078 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.4■□□□□ 0.54
CEP290O15078 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CEP290O15078 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CEP290O15078 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CEP290O15078 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CEP290O15078 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.4■□□□□ 0.54
CEP290O15078 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CEP290O15078 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CEP290O15078 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.4■□□□□ 0.54
CEP290O15078 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.4■□□□□ 0.54
CEP290O15078 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CEP290O15078 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.4■□□□□ 0.54
CEP290O15078 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CEP290O15078 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CEP290O15078 AL096828.2-201ENST00000567259 1965 ntBASIC18.39■□□□□ 0.54
CEP290O15078 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CEP290O15078 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CEP290O15078 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CEP290O15078 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CEP290O15078 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CEP290O15078 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CEP290O15078 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CEP290O15078 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CEP290O15078 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.39■□□□□ 0.53
CEP290O15078 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.39■□□□□ 0.53
CEP290O15078 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.39■□□□□ 0.53
CEP290O15078 CTBP2P5-201ENST00000454986 1264 ntBASIC18.39■□□□□ 0.53
CEP290O15078 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.39■□□□□ 0.53
CEP290O15078 AC055876.2-201ENST00000531834 546 ntBASIC18.39■□□□□ 0.53
CEP290O15078 MIR3909-201ENST00000579518 119 ntBASIC18.39■□□□□ 0.53
CEP290O15078 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.39■□□□□ 0.53
CEP290O15078 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.39■□□□□ 0.53
CEP290O15078 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.39■□□□□ 0.53
CEP290O15078 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.39■□□□□ 0.53
CEP290O15078 AL021578.1-201ENST00000613646 709 ntBASIC18.39■□□□□ 0.53
CEP290O15078 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.39■□□□□ 0.53
CEP290O15078 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CEP290O15078 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CEP290O15078 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
CEP290O15078 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CEP290O15078 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CEP290O15078 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.39■□□□□ 0.53
CEP290O15078 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.39■□□□□ 0.53
CEP290O15078 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.39■□□□□ 0.53
CEP290O15078 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.39■□□□□ 0.53
CEP290O15078 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CEP290O15078 AL589739.1-201ENST00000607720 493 ntBASIC18.39■□□□□ 0.53
CEP290O15078 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.39■□□□□ 0.53
CEP290O15078 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CEP290O15078 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CEP290O15078 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CEP290O15078 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 CETN4P-206ENST00000642099 2168 ntBASIC18.38■□□□□ 0.53
CEP290O15078 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.38■□□□□ 0.53
CEP290O15078 CROCCP4-201ENST00000457096 498 ntBASIC18.38■□□□□ 0.53
CEP290O15078 RNA5SP412-201ENST00000516234 123 ntBASIC18.38■□□□□ 0.53
CEP290O15078 DUTP2-201ENST00000519164 463 ntBASIC18.38■□□□□ 0.53
CEP290O15078 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.38■□□□□ 0.53
CEP290O15078 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 RARRES2P9-201ENST00000565168 469 ntBASIC18.38■□□□□ 0.53
CEP290O15078 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.38■□□□□ 0.53
CEP290O15078 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CEP290O15078 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.38■□□□□ 0.53
CEP290O15078 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.38■□□□□ 0.53
CEP290O15078 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.38■□□□□ 0.53
CEP290O15078 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CEP290O15078 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CEP290O15078 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CEP290O15078 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.38■□□□□ 0.53
CEP290O15078 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.38■□□□□ 0.53
CEP290O15078 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms