Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Cdr1E9Q0B4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdr1E9Q0B4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdr1E9Q0B4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdr1E9Q0B4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdr1E9Q0B4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdr1E9Q0B4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdr1E9Q0B4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdr1E9Q0B4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdr1E9Q0B4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdr1E9Q0B4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdr1E9Q0B4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdr1E9Q0B4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdr1E9Q0B4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdr1E9Q0B4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdr1E9Q0B4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.02□□□□□ -0.16
Cdr1E9Q0B4 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdr1E9Q0B4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.02□□□□□ -0.16
Cdr1E9Q0B4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.02□□□□□ -0.16
Cdr1E9Q0B4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdr1E9Q0B4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdr1E9Q0B4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdr1E9Q0B4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdr1E9Q0B4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdr1E9Q0B4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cdr1E9Q0B4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Gm8749-201ENSMUST00000117737 331 ntBASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdr1E9Q0B4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdr1E9Q0B4 Gm14371-201ENSMUST00000138925 1518 ntBASIC14□□□□□ -0.17
Cdr1E9Q0B4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdr1E9Q0B4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdr1E9Q0B4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdr1E9Q0B4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdr1E9Q0B4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Cdr1E9Q0B4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdr1E9Q0B4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdr1E9Q0B4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Cdr1E9Q0B4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdr1E9Q0B4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdr1E9Q0B4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms