Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Gm25925-201ENSMUST00000158314 306 ntBASIC10.8□□□□□ -0.68
Trav3n-3A0A0G2JEM0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms