Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mrpl40Q9Z2Q5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Mrpl40Q9Z2Q5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mrpl40Q9Z2Q5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mrpl40Q9Z2Q5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mrpl40Q9Z2Q5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Mrpl40Q9Z2Q5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.74■■□□□ 1.07
Mrpl40Q9Z2Q5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.74■■□□□ 1.07
Mrpl40Q9Z2Q5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Mrpl40Q9Z2Q5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mrpl40Q9Z2Q5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mrpl40Q9Z2Q5 Gm5921-201ENSMUST00000075898 882 ntBASIC21.73■■□□□ 1.07
Mrpl40Q9Z2Q5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mrpl40Q9Z2Q5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mrpl40Q9Z2Q5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.72■■□□□ 1.07
Mrpl40Q9Z2Q5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Mrpl40Q9Z2Q5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.72■■□□□ 1.07
Mrpl40Q9Z2Q5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Mrpl40Q9Z2Q5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mrpl40Q9Z2Q5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Mrpl40Q9Z2Q5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mrpl40Q9Z2Q5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mrpl40Q9Z2Q5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.71■■□□□ 1.07
Mrpl40Q9Z2Q5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mrpl40Q9Z2Q5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mrpl40Q9Z2Q5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mrpl40Q9Z2Q5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Mrpl40Q9Z2Q5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Mrpl40Q9Z2Q5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
Mrpl40Q9Z2Q5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.7■■□□□ 1.06
Mrpl40Q9Z2Q5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Mrpl40Q9Z2Q5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Mrpl40Q9Z2Q5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mrpl40Q9Z2Q5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mrpl40Q9Z2Q5 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.69■■□□□ 1.06
Mrpl40Q9Z2Q5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mrpl40Q9Z2Q5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mrpl40Q9Z2Q5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mrpl40Q9Z2Q5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mrpl40Q9Z2Q5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mrpl40Q9Z2Q5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Mrpl40Q9Z2Q5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mrpl40Q9Z2Q5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mrpl40Q9Z2Q5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Mrpl40Q9Z2Q5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mrpl40Q9Z2Q5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Mrpl40Q9Z2Q5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mrpl40Q9Z2Q5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mrpl40Q9Z2Q5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Mrpl40Q9Z2Q5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mrpl40Q9Z2Q5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mrpl40Q9Z2Q5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mrpl40Q9Z2Q5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mrpl40Q9Z2Q5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl40Q9Z2Q5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl40Q9Z2Q5 Gm5812-201ENSMUST00000061073 957 ntBASIC21.65■■□□□ 1.06
Mrpl40Q9Z2Q5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl40Q9Z2Q5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl40Q9Z2Q5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl40Q9Z2Q5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Mrpl40Q9Z2Q5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Mrpl40Q9Z2Q5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mrpl40Q9Z2Q5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Mrpl40Q9Z2Q5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
Mrpl40Q9Z2Q5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.63■■□□□ 1.05
Mrpl40Q9Z2Q5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Mrpl40Q9Z2Q5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.63■■□□□ 1.05
Mrpl40Q9Z2Q5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mrpl40Q9Z2Q5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Mrpl40Q9Z2Q5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mrpl40Q9Z2Q5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mrpl40Q9Z2Q5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mrpl40Q9Z2Q5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Mrpl40Q9Z2Q5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Mrpl40Q9Z2Q5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mrpl40Q9Z2Q5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mrpl40Q9Z2Q5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Mrpl40Q9Z2Q5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Mrpl40Q9Z2Q5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Mrpl40Q9Z2Q5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Mrpl40Q9Z2Q5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mrpl40Q9Z2Q5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Mrpl40Q9Z2Q5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.61■■□□□ 1.05
Mrpl40Q9Z2Q5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Mrpl40Q9Z2Q5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.6■■□□□ 1.05
Mrpl40Q9Z2Q5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Mrpl40Q9Z2Q5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Mrpl40Q9Z2Q5 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.6■■□□□ 1.05
Mrpl40Q9Z2Q5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Mrpl40Q9Z2Q5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Mrpl40Q9Z2Q5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Mrpl40Q9Z2Q5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Mrpl40Q9Z2Q5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Mrpl40Q9Z2Q5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.59■■□□□ 1.05
Mrpl40Q9Z2Q5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Mrpl40Q9Z2Q5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Mrpl40Q9Z2Q5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Mrpl40Q9Z2Q5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Mrpl40Q9Z2Q5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Mrpl40Q9Z2Q5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms