Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcf1Q9QZM3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcf1Q9QZM3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.74■□□□□ 0.75
Clcf1Q9QZM3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clcf1Q9QZM3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clcf1Q9QZM3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Clcf1Q9QZM3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcf1Q9QZM3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcf1Q9QZM3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Clcf1Q9QZM3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcf1Q9QZM3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcf1Q9QZM3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcf1Q9QZM3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clcf1Q9QZM3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clcf1Q9QZM3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcf1Q9QZM3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcf1Q9QZM3 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.72■□□□□ 0.75
Clcf1Q9QZM3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clcf1Q9QZM3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Clcf1Q9QZM3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.7■□□□□ 0.74
Clcf1Q9QZM3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Clcf1Q9QZM3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcf1Q9QZM3 Gm5921-201ENSMUST00000075898 882 ntBASIC19.7■□□□□ 0.74
Clcf1Q9QZM3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcf1Q9QZM3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcf1Q9QZM3 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.69■□□□□ 0.74
Clcf1Q9QZM3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcf1Q9QZM3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcf1Q9QZM3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcf1Q9QZM3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcf1Q9QZM3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.68■□□□□ 0.74
Clcf1Q9QZM3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.68■□□□□ 0.74
Clcf1Q9QZM3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Clcf1Q9QZM3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Clcf1Q9QZM3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcf1Q9QZM3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clcf1Q9QZM3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clcf1Q9QZM3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcf1Q9QZM3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clcf1Q9QZM3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcf1Q9QZM3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Clcf1Q9QZM3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Clcf1Q9QZM3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcf1Q9QZM3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcf1Q9QZM3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms