Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcf1Q9QZM3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcf1Q9QZM3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcf1Q9QZM3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.74■□□□□ 0.75
Clcf1Q9QZM3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clcf1Q9QZM3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clcf1Q9QZM3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Clcf1Q9QZM3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcf1Q9QZM3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcf1Q9QZM3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Clcf1Q9QZM3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcf1Q9QZM3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcf1Q9QZM3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcf1Q9QZM3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clcf1Q9QZM3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clcf1Q9QZM3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcf1Q9QZM3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcf1Q9QZM3 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.72■□□□□ 0.75
Clcf1Q9QZM3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clcf1Q9QZM3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.71■□□□□ 0.75
Clcf1Q9QZM3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
Clcf1Q9QZM3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.7■□□□□ 0.74
Clcf1Q9QZM3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Clcf1Q9QZM3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcf1Q9QZM3 Gm5921-201ENSMUST00000075898 882 ntBASIC19.7■□□□□ 0.74
Clcf1Q9QZM3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcf1Q9QZM3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcf1Q9QZM3 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.69■□□□□ 0.74
Clcf1Q9QZM3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcf1Q9QZM3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clcf1Q9QZM3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcf1Q9QZM3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clcf1Q9QZM3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.68■□□□□ 0.74
Clcf1Q9QZM3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.68■□□□□ 0.74
Clcf1Q9QZM3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Clcf1Q9QZM3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.67■□□□□ 0.74
Clcf1Q9QZM3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Clcf1Q9QZM3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcf1Q9QZM3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Clcf1Q9QZM3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcf1Q9QZM3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clcf1Q9QZM3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clcf1Q9QZM3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcf1Q9QZM3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Clcf1Q9QZM3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcf1Q9QZM3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Clcf1Q9QZM3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Clcf1Q9QZM3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcf1Q9QZM3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcf1Q9QZM3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcf1Q9QZM3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms